Solved
I the Federal Wages page, there is "Wage difference/tax-exempt cost of living allowance" with a box one can put a check mark, but it does not do anything.
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The HI wages were larger than the Federal, so according to N-11 instructions, you are to add the difference between the W-2 box 1 and 16 on the N-11 line 8 (not 7 above). ProConnect was not calculating correctly, but in a chat, I got help from a ProConnect Expert on how to make the system work correctly.
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